mrsiprep.interfaces.chimera

Chimera parcellation wrapper.

Functions

check_chimera()

run_chimera(bids_dir, derivatives_dir, ...)

Exceptions

ChimeraError

Raised when Chimera parcellation cannot be created.
exception mrsiprep.interfaces.chimera.ChimeraError[source]

Bases: RuntimeError

Raised when Chimera parcellation cannot be created.

mrsiprep.interfaces.chimera.check_chimera()[source]
Return type:

None

mrsiprep.interfaces.chimera.run_chimera(bids_dir, derivatives_dir, fs_subjects_dir, t1_path, subject, session, scheme, scale, grow, verbose=False, milestones=False, force=False, debug=None)[source]
Parameters:

  • bids_dir (str | Path)

  • derivatives_dir (str | Path)

  • fs_subjects_dir (str | Path)

  • t1_path (str | Path)

  • subject (str)

  • session (str | None)

  • scheme (str)

  • scale (int)

  • grow (int)

  • verbose (bool)

  • milestones (bool)

  • force (bool)

Return type:

Path